Inspecting integrated peaks
I executed following commands:
t=emzed.peak_picking.run_feature_finder_metabo(pm, mtd_noise_threshold_int=8e4)
# to limit number of lines
sub=t.filter(t['feature_size']>2)
emzed.quantification.integrate(sub, 'linear')
t_int=_
emzed.gui.inspect(t_int)
which resulted following error:
emzed.gui.inspect(t_int)
Traceback (most recent call last):
File "<ipython-input-25-a43076373040>", line 1, in <module>
emzed.gui.inspect(t_int)
File "C:\Users\pkiefer\AppData\Roaming\emzed3\remote_venv\lib\site-packages\emzed_gui\inspect.py", line 28, in inspect
inspect_table(what, *args, **kwargs)
File "C:\Users\pkiefer\AppData\Roaming\emzed3\remote_venv\lib\site-packages\emzed_gui\table_explorer\inspect.py", line 47, in inspect
custom_buttons_config=custom_buttons_config,
File "C:\Users\pkiefer\AppData\Roaming\emzed3\remote_venv\lib\site-packages\emzed_gui\table_explorer\table_explorer.py", line 160, in __init__
TableModel.table_model_for(table, parent=self) for table in tables
File "C:\Users\pkiefer\AppData\Roaming\emzed3\remote_venv\lib\site-packages\emzed_gui\table_explorer\table_explorer.py", line 160, in <listcomp>
TableModel.table_model_for(table, parent=self) for table in tables
File "C:\Users\pkiefer\AppData\Roaming\emzed3\remote_venv\lib\site-packages\emzed_gui\table_explorer\table_explorer_model.py", line 772, in table_model_for
return MutableTableModel(table, parent)
File "C:\Users\pkiefer\AppData\Roaming\emzed3\remote_venv\lib\site-packages\emzed_gui\table_explorer\table_explorer_model.py", line 779, in __init__
super(MutableTableModel, self).__init__(table, parent)
File "C:\Users\pkiefer\AppData\Roaming\emzed3\remote_venv\lib\site-packages\emzed_gui\table_explorer\table_explorer_model.py", line 95, in __init__
self._prefetch_rows()
File "C:\Users\pkiefer\AppData\Roaming\emzed3\remote_venv\lib\site-packages\emzed_gui\table_explorer\table_explorer_model.py", line 108, in _prefetch_rows
self._get_table_row(row._index)
File "C:\Users\pkiefer\AppData\Roaming\emzed3\remote_venv\lib\site-packages\emzed_gui\table_explorer\table_explorer_model.py", line 179, in _get_table_row
self._cache[ridx] = self.table[ridx]
File "C:\Users\pkiefer\AppData\Roaming\emzed3\remote_venv\lib\site-packages\emzed\table\table.py", line 508, in __getitem__
return self._model.get_row(index)
File "C:\Users\pkiefer\AppData\Roaming\emzed3\remote_venv\lib\site-packages\emzed\table\base_models.py", line 46, in wrapped
return method(self, *a, **kw)
File "C:\Users\pkiefer\AppData\Roaming\emzed3\remote_venv\lib\site-packages\emzed\table\base_models.py", line 376, in get_row
raise IndexError(f"index {index} out of range")
IndexError: index 166 out of range