Can not run geiser in a project tracked with Git

Dears, I have trouble to run Geiser when I am in a directory with a .git folder. Everything is fine without the Git stuff. Any clue ? I am not sure it is a Geiser issue. Here is the messages when I run Emacs with the --debug-init option:

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Unable to activate package ‘magit’.
Required package ‘git-commit-3.3.0’ is unavailable
Unable to activate package ‘hydra’.
Required package ‘lv-0’ is unavailable
Unable to activate package ‘use-package’.
Required package ‘bind-key-2.4’ is unavailable
Loading /home/jeko/.emacs.d/README.el (source)...
Loading iso-transl...done
Loading /home/jeko/.emacs.d/guile-ide.el (source)...
[yas] Prepared just-in-time loading of snippets successfully.
Loading /home/jeko/.emacs.d/.mc-lists.el (source)...done
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Loading /home/jeko/.emacs.d/README.el (source)...done
Loaded ~/.emacs.d/README.el
Turning on magit-auto-revert-mode...done
For information about GNU Emacs and the GNU system, type C-h C-a.
Starting Geiser REPL ... [2 times]
File mode specification error: (void-function project-root)
Package cl is deprecated
In "ice-9/boot-9.scm":
no code for module (jeko-packages)
user-error: Minibuffer window is not active