Commit 0d04168f authored by eladnoor's avatar eladnoor

isort

parent d0def804
Pipeline #46348200 failed with stage
......@@ -25,13 +25,16 @@
# THE SOFTWARE.
from equilibrator_api import ComponentContribution, Reaction, Q_
import logging
import argparse
import pandas as pd
import numpy as np
import logging
import sys
import numpy as np
import pandas as pd
from equilibrator_api import Q_, ComponentContribution, Reaction
if __name__ == '__main__':
parser = argparse.ArgumentParser(
......
......@@ -32,7 +32,8 @@
import argparse
import logging
import sys
from equilibrator_api import Reaction, ComponentContribution, ureg
from equilibrator_api import ComponentContribution, Reaction, ureg
def MakeParser():
......
......@@ -27,9 +27,12 @@
import argparse
import logging
from equilibrator_api import Pathway
from matplotlib.backends.backend_pdf import PdfPages
import pandas as pd
from matplotlib.backends.backend_pdf import PdfPages
from equilibrator_api import Pathway
if __name__ == '__main__':
......
......@@ -26,9 +26,8 @@
from equilibrator_cache.thermodynamic_constants import (
FARADAY, POSSIBLE_REACTION_ARROWS, R, Rlog10, default_I, default_pH,
default_T, physiological_concentration, standard_concentration,
Q_)
FARADAY, POSSIBLE_REACTION_ARROWS, Q_, R, Rlog10, default_I, default_pH,
default_T, physiological_concentration, standard_concentration)
default_pMg = Q_("14.0")
......
......@@ -34,8 +34,7 @@ import pandas as pd
from optlang.glpk_interface import Constraint, Model, Objective, Variable
from .settings import (
R, default_T, Q_, physiological_concentration,
standard_concentration)
Q_, R, default_T, physiological_concentration, standard_concentration)
class PathwayMDFData(object):
......
......@@ -29,8 +29,8 @@ import warnings
import pytest
from equilibrator_api import (
ComponentContribution, Reaction, ccache, Q_)
from equilibrator_api import Q_, ComponentContribution, Reaction, ccache
def assert_with_unit(obs_dg: float, exp_dg: float, abs: float = 1e-1,
unit: str = "kJ/mol"):
......@@ -102,4 +102,3 @@ def test_unresolved_reactions(comp_contribution):
_, dg_uncertainty = comp_contribution.standard_dg_prime(reaction)
assert float(dg_uncertainty / Q_("kJ/mol")) > 1e4
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