Several fixes and enhancements for AMBER NetCDF trajectories
- Fixed a bug related to reordering the atom order when an atom index is present in NetCDF; only affects trajectories written with LAMMPS netcdf/mpiio dump style.
- Fixed #150 (closed) NetCDF file format is now autodetected and can be read with the ase.io.read function.
- Reduce memory footprint when reading large files.
- Removed code for scipy.io.netcdf.netcdf_file ; was commented out before