update of documentation
I think the documentation should be updated with the following:
- the top-level json keywords
base_directory
(optional) andsciatran_md5
(mandatory) should be explained - the expansion of relative paths and of paths starting with a tilde should be explained (see related issue)
By the way, documentation on https://pyatran.readthedocs.io/en/stable/index.html is behind the doc strings in the code. See for example the doc string for setup_runtime.
Edited by Bram Sanders