Change optional Analyses Overview to auto-comments
Background
To support high volume analyses of small gene panels, the Overview page currently has the possibility for sectioning analyses into "all variants classified" or "missing classification". However, this solution places severe limitations on the filter options.
Implementation
A better solution is to auto-add Overview comments to analyses on import:
-
ALL CLASSIFIED
if the analysis has no unfiltered* variants without classification (= current "All variants classified" sections) -
NO VARIANTS
if the analysis has no unfiltered* variants -
MISSING CLASSIFICATION
when there is at least one unclassified, non-filtered* variant (= current "Missing classification" sections) - NB: This might not be necessary, as it is implicit from the lack of other comments.
- Using the given filter config (usually the default)
Together with the Overview filter (#179 (closed)) this should work practically the same as the current option. The major difference is that comments will not be updated if variant classifications are updated in other analyses, but the impact of this should be neglible.
The option to auto-add comments should be configurable.
Solution was discussed and confirmed with EKG in meeting 05.06.2020.
Edited by Morten C. Eike