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Make it possible to override envs in Makefile. Add caching for Singularity. 3 of 15 checklist items completed
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Vcfanno dupes revisited 10 of 15 checklist items completed
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Add CI-test to check datasets.json against digital ocean 2 of 15 checklist items completed
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Move vt decompose and vt normalize before slicing, to avoid slicing on non-normalized data 2 of 15 checklist items completed
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Update ClinVar to 20200907 6 of 6 checklist items completed
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Fix pyrsisten version to 0.15.7 (python 2 compatible) 1 of 15 checklist items completed
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Convert to py3 3 of 15 checklist items completed
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Resolve "Ensure that all multiallelic blocks are complete" 5 of 15 checklist items completed
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Add code to remove star alleles that are conflicting with downstream tools 3 of 15 checklist items completed
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Remove link to sliced vcf 1 of 15 checklist items completed
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PYTHONPATH messes up import when using python3 1 of 15 checklist items completed
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Resolve "Update UTA to 20201027." 2 of 15 checklist items completed
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updated clinvar 6 of 6 checklist items completed
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Allow non-default port for Postgres 1 of 15 checklist items completed
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