Commit 25731f5c authored by akdel's avatar akdel


parent d9240c69
# OptiMap - Optical-map moleculue alignment tool
## Requirements:
Depends on [OptiScan](
## Installation
```shell script
git clone
cd OptiMap
pip install .
## Test with toy data
```shell script
OptiSpeed ./data/molecules.npy --first_score=0.8 --second_score=0.75 --output_filename=test_output.tsv --combine_sparse=True
OptiSpeed ./data/molecules.bnx --first_score=0.8 --second_score=0.75 --output_filename=test_output.tsv --combine_sparse=True
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