Commit 25731f5c authored by akdel's avatar akdel

added README.md

parent d9240c69
# OptiMap - Optical-map moleculue alignment tool
## Requirements:
Depends on [OptiScan](https://gitlab.com/akdel/OptiScan)
## Installation
```shell script
git clone https://gitlab.com/akdel/OptiMap.git
cd OptiMap
pip install .
```
## Test with toy data
```shell script
OptiSpeed ./data/molecules.npy --first_score=0.8 --second_score=0.75 --output_filename=test_output.tsv --combine_sparse=True
OptiSpeed ./data/molecules.bnx --first_score=0.8 --second_score=0.75 --output_filename=test_output.tsv --combine_sparse=True
```
\ No newline at end of file
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment