pvalues returned by the `get_sig_clusters` incorrect
get_sig_clusters
method of the MNEClusterPermutation class seems incorrect?
pvalues returned by pval = stats.percentileofscore(self.nulls, cstats[idx])
is a percentile, and it overlooks negative clusters as the null distribution self.nulls
has positive values.
I think the correct way to compute pvalues would be pval = 1 - stats.percentileofscore(self.nulls, np.abs(cstats[idx]))/100
.