get_efeatures option on multiple organisms
Hello,
We intend to apply this tool across various organisms. Upon reviewing the tool's specifications, we noted that one of the required arguments for get_efeatures is the organism symbol. The acceptable symbols include: Hsap, Ptro, Mmul, Mmus, Rnor, Cfam, Btau, or NA (for all other species).
Our observation is as follows: When executing the command on human or mouse (using the symbols Hsap and Mmus, respectively), the output appears as expected. However, when attempting to run the tool on different organisms and utilizing the NA argument, we encountered issues. Specifically, the output displayed unnamed columns for approximately 30 features, and the column order appeared to be mixed up. Attached is a screenshot illustrating the column names we received.
Moreover, we attempted to execute get_efeatures with the NA argument on human and mouse samples, and we encountered the same issue of unnamed columns.
(Attached is a screenshot depicting the expected output column names for human and mouse when using the organism-specific argument.)
Your assistance in resolving this matter would be greatly appreciated.
Thank you in advance for your attention to this issue

