f951: Warning: Nonexistent include directory ‘/home/user001/q-e-qe-6.2.0//FoX/finclude’ [-Wmissing-include-dirs]
configure says success in ./configure --disable-parallel. But when I use make all it gives me error starting with the title
full error in ./configure --disable-parallel
touch make.inc
for dir in \
CPV LAXlib FFTXlib UtilXlib Modules PP PW EPW \
KS_Solvers/CG KS_Solvers/Davidson KS_Solvers/Davidson_RCI \
NEB ACFDT COUPLE GWW XSpectra PWCOND \
atomic clib LR_Modules pwtools upftools \
dev-tools extlibs Environ TDDFPT PHonon GWW \
; do \
if test -d $dir ; then \
( cd $dir ; \
make TLDEPS= clean ) \
fi \
done
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/CPV'
( cd src ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/CPV/src'
/bin/rm -f cppp.x *.o *.mod cpver.h *.i core* *_tmp.f90 fort* \
*.cpp *.d *.L *.a *.s cp.x manycp.x wfdd.x
/bin/rm -rf ../../bin/manycp.x ../../bin/cppp.x ../../bin/cp.x ../../bin/wfdd.x
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/CPV/src'
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/CPV'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/LAXlib'
/bin/rm -f *.o *.a *.d *.i *~ *_tmp.f90 *.mod *.L *.x
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/LAXlib'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/FFTXlib'
/bin/rm -f *.o *.a *.d *.i *~ *_tmp.f90 *.mod *.L
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/FFTXlib'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/UtilXlib'
/bin/rm -f *.o *.a *.d *.i *~ *_tmp.f90 *.mod *.L *.x
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/UtilXlib'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/Modules'
/bin/rm -f *.o *.a *.d *.i *~ *_tmp.f90 *.mod *.L
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/Modules'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/PP'
if test -d examples ; then \
( cd examples ; ./clean_all ) ; fi
if test -d src ; then \
( cd src ; make clean ) ; fi
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/PP/src'
/bin/rm -f *.x *.o *~ *_tmp.f90 *.d *.mod *.i *.L libpp.a
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/PP/src'
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/PP'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/PW'
if test -d examples ; then \
( cd examples ; ./clean_all ) ; fi
( cd src ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/PW/src'
/bin/rm -f *.x *.o *.a *~ *_tmp.f90 *.d *.mod *.i *.L
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/PW/src'
( cd tools ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/PW/tools'
/bin/rm -f pwi2xsf pwi2xsf_old *.x *.o *~ *_tmp.f90 *.mod *.d *.i *.L
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/PW/tools'
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/PW'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/EPW'
cd src ; rm -f *.o *.mod *~ *.F90
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/EPW'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/KS_Solvers/CG'
/bin/rm -f *.o *.a *.d *.i *~ *_tmp.f90 *.mod *.L *.x
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/KS_Solvers/CG'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/KS_Solvers/Davidson'
/bin/rm -f *.o *.a *.d *.i *~ *_tmp.f90 *.mod *.L *.x
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/KS_Solvers/Davidson'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/KS_Solvers/Davidson_RCI'
/bin/rm -f *.o *.a *.d *.i *~ *_tmp.f90 *.mod *.L *.x
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/KS_Solvers/Davidson_RCI'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/NEB'
if test -d examples ; then \
( cd examples ; ./clean_all ) ; fi
if test -d src ; then \
( cd src ; make clean ) ; fi
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/NEB/src'
/bin/rm -f *.x *.o *.a *~ *_tmp.f90 *.d *.mod *.i *.L
/bin/rm -f ../../bin/neb.x
/bin/rm -f ../../bin/path_interpolation.x
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/NEB/src'
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/NEB'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/COUPLE'
if test -d examples ; then \
( cd examples ; make -f Makefile.gfortran clean ) ; fi
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/COUPLE/examples'
/bin/rm -f *.x *.o *.a *~ *.F90 *.d *.mod *.i *.L
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/COUPLE/examples'
if test -d tests ; then \
( cd tests ; ./clean_all ) ; fi
if test -d src ; then \
( cd src ; make clean ) ; fi ;\
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/COUPLE/src'
/bin/rm -f *.x *.o *.a *~ *_tmp.f90 *.d *.mod *.i *.L
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/COUPLE/src'
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/COUPLE'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/GWW'
( cd pw4gww ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/GWW/pw4gww'
/bin/rm -fv *.x *.o *~ *_tmp.f90 *.d *.mod *.i *.L libpw4gww.a
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/GWW/pw4gww'
( cd head
; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/GWW/head'
/bin/rm -fv *.x *.o *.a *~ *_tmp.f90 *.d *.mod *.i *.L
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/GWW/head'
( cd gww
; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/GWW/gww'
/bin/rm -f -v gww.x gww_fit.x *.o *~ *_tmp.f90 *.d *.mod *.i *.a
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/GWW/gww'
( cd minpack ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/GWW/minpack'
/bin/rm -fv minpacklib.a *.o
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/GWW/minpack'
( cd bse
; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/GWW/bse'
/bin/rm -f *.x *.o *~ *_tmp.f90 *.d *.mod *.i *.L libbse.a
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/GWW/bse'
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/GWW'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/XSpectra'
( cd src ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/XSpectra/src'
/bin/rm -f *.x *.o *~ *_tmp.f90 *.d *.mod *.i *.L
/bin/rm -f ../../bin/xspectra.x
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/XSpectra/src'
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/XSpectra'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/PWCOND'
if test -d examples ; then \
( cd examples ; ./clean_all ) ; fi
( cd src ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/PWCOND/src'
/bin/rm -f *.x *.o *~ *_tmp.f90 *.d *.mod *.i *.a *.L
/bin/rm -f ../../bin/pwcond.x
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/PWCOND/src'
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/PWCOND'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/atomic'
if test -d examples ; then \
( cd examples ; ./make_clean ) ; fi
cleaning all : done
if test -d pseudo_library ; then \
( cd pseudo_library ; ./make_clean) ; fi
( cd src ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/atomic/src'
/bin/rm -f *.o *_tmp.f90 *.x *~ *.d *.mod *.tmp.* *.L
/bin/rm -f ../../bin/ld1.x
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/atomic/src'
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/atomic'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/clib'
rm -f clib.a *.o *.mod *.i core*
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/clib'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/LR_Modules'
/bin/rm -f *.o *.a *.d *.i *~ *_tmp.f90 *.mod *.L
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/LR_Modules'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/upftools'
/bin/rm -f *.x *.o *~ *_tmp.f90 *.mod *.d *.i *.L
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/upftools'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/dev-tools'
rm INPUT_*.xml INPUT_*.xml.tcl *-help.tcl
rm: cannot remove 'INPUT_*.xml': No such file or directory
rm: cannot remove 'INPUT_*.xml.tcl': No such file or directory
rm: cannot remove '*-help.tcl': No such file or directory
make[1]: [Makefile:32: clean] Error 1 (ignored)
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/dev-tools'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/TDDFPT'
( cd src ; make clean ; )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/TDDFPT/src'
/bin/rm -f ../bin/turbo_lanczos.x ../bin/turbo_davidson.x ../bin/turbo_eels.x *.x *.o *~ *.d *.mod *.i work.pc *.a *_tmp.f90
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/TDDFPT/src'
( cd tools ; make clean ; )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/TDDFPT/tools'
rm -f ../bin/turbo_spectrum.x *.x *.o *.mod *_tmp.f90
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/TDDFPT/tools'
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/TDDFPT'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/PHonon'
( cd PH ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/PHonon/PH'
/bin/rm -f *.x *.o *.a *~ *_tmp.f90 *.d *.mod *.i *.L
/bin/rm -rf ../../bin/ph.x ../../bin/dynmat.x ../../bin/matdyn.x \
../../bin/q2r.x ../../bin/q2trans.x ../../bin/q2trans_fd.x ../../bin/lambda.x ../../bin/fqha.x \
../../bin/alpha2f.x ../../disp_width.x
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/PHonon/PH'
( cd Gamma ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/PHonon/Gamma'
/bin/rm -f *.x *.o *.d *.i *~ *_tmp.f90 *.mod *.L *.a
/bin/rm -f ../../bin/phcg.x
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/PHonon/Gamma'
if test -d examples ; then \
( cd examples ; ./clean_all ) ; fi
( cd FD ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/PHonon/FD'
/bin/rm -f *.x *.o *~ *_tmp.f90 *.d *.mod *.i *.L libfd.a
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/PHonon/FD'
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/PHonon'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/GWW'
( cd pw4gww ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/GWW/pw4gww'
/bin/rm -fv *.x *.o *~ *_tmp.f90 *.d *.mod *.i *.L libpw4gww.a
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/GWW/pw4gww'
( cd head
; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/GWW/head'
/bin/rm -fv *.x *.o *.a *~ *_tmp.f90 *.d *.mod *.i *.L
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/GWW/head'
( cd gww
; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/GWW/gww'
/bin/rm -f -v gww.x gww_fit.x *.o *~ *_tmp.f90 *.d *.mod *.i *.a
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/GWW/gww'
( cd minpack ; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/GWW/minpack'
/bin/rm -fv minpacklib.a *.o
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/GWW/minpack'
( cd bse
; make clean )
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/GWW/bse'
/bin/rm -f *.x *.o *~ *_tmp.f90 *.d *.mod *.i *.L libbse.a
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/GWW/bse'
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/GWW'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/install'
if test -d ../W90; then (cd ../W90; \
make veryclean); fi
rm -f ../bin/wannier90.x
rm -rf ./make-w90 ./configure-w90
if test -d ../WANT; then (cd ../WANT; \
make clean); fi
rm -rf ./make-want ./configure-want
if test -d ../YAMBO; then (cd ../YAMBO; \
make clean); fi
rm -rf ./make-yambo ./configure-yambo
if test -d ../YAMBO_DEVEL; then (cd ../YAMBO_DEVEL; \
make clean); fi
rm -rf ./make-yambo-devel ./configure-yambo-devel
if test -d ../PLUMED; then (cd ../PLUMED; \
export plumedir="`pwd`" ; \
cd ../ ; ./plumedpatch_qespresso_5.2.sh -revert); fi
cd ../PW ; make clean; cd ../CPV ; make clean
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/PW'
if test -d examples ; then \
( cd examples ; ./clean_all ) ; fi
( cd src ; make clean )
make[3]: Entering directory '/home/user001/q-e-qe-6.2.0/PW/src'
/bin/rm -f *.x *.o *.a *~ *_tmp.f90 *.d *.mod *.i *.L
make[3]: Leaving directory '/home/user001/q-e-qe-6.2.0/PW/src'
( cd tools ; make clean )
make[3]: Entering directory '/home/user001/q-e-qe-6.2.0/PW/tools'
/bin/rm -f pwi2xsf pwi2xsf_old *.x *.o *~ *_tmp.f90 *.mod *.d *.i *.L
make[3]: Leaving directory '/home/user001/q-e-qe-6.2.0/PW/tools'
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/PW'
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/CPV'
( cd src ; make clean )
make[3]: Entering directory '/home/user001/q-e-qe-6.2.0/CPV/src'
/bin/rm -f cppp.x *.o *.mod cpver.h *.i core* *_tmp.f90 fort* \
*.cpp *.d *.L *.a *.s cp.x manycp.x wfdd.x
/bin/rm -rf ../../bin/manycp.x ../../bin/cppp.x ../../bin/cp.x ../../bin/wfdd.x
make[3]: Leaving directory '/home/user001/q-e-qe-6.2.0/CPV/src'
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/CPV'
rm -rf ./make-plumed ./patch-plumed
if test -d ../GIPAW; then (cd ../GIPAW; make clean); fi
rm -f ../bin/gipaw.x
rm -rf ./make-gipaw
if test -d ../West; then (cd ../West; \
make clean); fi
rm -rf ./make-west ./configure-west
if test -d ../SternheimerGW/src; then \
cd ../SternheimerGW/src ; make clean ; \
fi
rm -rf ./make-SternheimerGW
if test -d ../test-suite; then (cd ../test-suite; \
make clean); fi
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/test-suite'
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/test-suite'
if test -d ../SaX; then (cd ../SaX; \
make clean); fi
rm -rf ./make-sax ./configure-sax
if test -d ../D3Q; then (cd ../D3Q; make clean); fi
rm -f ../bin/d3q.x
rm -f ../bin/d3_*.x
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/install'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/install'
if test -d ../LAPACK; then (cd ../LAPACK; make clean); fi
if test -d ../ELPA; then (cd ../ELPA; make clean); fi
if test -d ../S3DE; then (cd ../S3DE; make clean); fi
if test -d ../iotk; then (rm -R -f ../iotk); fi
if test -e ../S3DE/iotk/src/iotk.x; then \
rm -f ../S3DE/iotk/src/iotk.x; fi
(rm -f ../bin/iotk; \
rm -f ../bin/iotk.x; \
rm -f ../bin/iotk_print_kinds.x)
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/install'
/bin/rm -rf bin/*.x tempdir
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/install'
if test -d ../W90; then (cd ../W90; \
make veryclean); fi
rm -f ../bin/wannier90.x
rm -rf ./make-w90 ./configure-w90
if test -d ../W90; then (rm -R -f ../W90); fi
if test -d ../wannier90-2.1.0; then (rm -R -f ../wannier90-2.1.0); fi
rm -f ../bin/wannier90.x
rm -rf ./uncompress-w90
if test -d ../WANT; then (cd ../WANT; \
make clean); fi
rm -rf ./make-want ./configure-want
if test -d ../WANT; then (rm -R -f ../WANT); fi
if test -d ../want; then (rm -R -f ../want); fi
if test -e ../archive/want.tar.gz ; then (rm -f ../archive/want.tar.gz); fi
rm -rf ./uncompress-want ./configure.h
if test -d ../YAMBO; then (cd ../YAMBO; \
make clean); fi
rm -rf ./make-yambo ./configure-yambo
if test -d ../YAMBO; then (rm -R -f ../YAMBO); fi
if test -d ../yambo-stable; then (rm -R -f ../yambo-stable); fi
rm -rf ./uncompress-yambo
if test -d ../YAMBO_DEVEL; then (cd ../YAMBO_DEVEL; \
make clean); fi
rm -rf ./make-yambo-devel ./configure-yambo-devel
if test -d ../YAMBO_DEVEL; then (rm -R -f ../YAMBO_DEVEL); fi
if test -d ../yambo-devel; then (rm -R -f ../yambo-devel); fi
rm -rf ./uncompress-yambo-devel
if test -d ../PLUMED; then (cd ../PLUMED; \
export plumedir="`pwd`" ; \
cd ../ ; ./plumedpatch_qespresso_5.2.sh -revert); fi
cd ../PW ; make clean; cd ../CPV ; make clean
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/PW'
if test -d examples ; then \
( cd examples ; ./clean_all ) ; fi
( cd src ; make clean )
make[3]: Entering directory '/home/user001/q-e-qe-6.2.0/PW/src'
/bin/rm -f *.x *.o *.a *~ *_tmp.f90 *.d *.mod *.i *.L
make[3]: Leaving directory '/home/user001/q-e-qe-6.2.0/PW/src'
( cd tools ; make clean )
make[3]: Entering directory '/home/user001/q-e-qe-6.2.0/PW/tools'
/bin/rm -f pwi2xsf pwi2xsf_old *.x *.o *~ *_tmp.f90 *.mod *.d *.i *.L
make[3]: Leaving directory '/home/user001/q-e-qe-6.2.0/PW/tools'
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/PW'
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/CPV'
( cd src ; make clean )
make[3]: Entering directory '/home/user001/q-e-qe-6.2.0/CPV/src'
/bin/rm -f cppp.x *.o *.mod cpver.h *.i core* *_tmp.f90 fort* \
*.cpp *.d *.L *.a *.s cp.x manycp.x wfdd.x
/bin/rm -rf ../../bin/manycp.x ../../bin/cppp.x ../../bin/cp.x ../../bin/wfdd.x
make[3]: Leaving directory '/home/user001/q-e-qe-6.2.0/CPV/src'
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/CPV'
rm -rf ./make-plumed ./patch-plumed
if test -d ../PLUMED; then (rm -R -f ../PLUMED); fi
if test -d ../plumed-1.3-qe; then (rm -R -f ../plumed-1.3-qe); fi
rm -rf ./uncompress-plumed ../plumedpatch_qespresso_5.2.sh
if test -d ../GIPAW; then (cd ../GIPAW; make clean); fi
rm -f ../bin/gipaw.x
rm -rf ./make-gipaw
if test -d ../GIPAW; then (cd ../GIPAW; \
rm -f config.log config.status ); fi
rm -rf ./configure-gipaw
if test -d ../West; then (cd ../West; \
make clean); fi
rm -rf ./make-west ./configure-west
if test -d ../SternheimerGW/src; then \
cd ../SternheimerGW/src ; make clean ; \
fi
rm -rf ./make-SternheimerGW
if test -d ../SternheimerGW; then (rm -R -f ../SternheimerGW); fi
if test -d ../SternheimerGW-0.14_qe6.2; then (rm -R -f ../SternheimerGW-0.14_qe6.2); fi
rm -rf ./uncompress-SternheimerGW
if test -d ../test-suite; then (cd ../test-suite; \
make clean); fi
make[2]: Entering directory '/home/user001/q-e-qe-6.2.0/test-suite'
make[2]: Leaving directory '/home/user001/q-e-qe-6.2.0/test-suite'
if test -d ../SaX; then (cd ../SaX; \
make clean); fi
rm -rf ./make-sax ./configure-sax
if test -d ../SaX; then (rm -R -f ../SaX); fi
if test -d ../sax-2.0.3; then (rm -R -f ../sax-2.0.3); fi
rm -rf ./uncompress-sax
make[1]: Circular d3q_distclean <- d3q_distclean dependency dropped.
# also delete the tgz archive
rm -f ../archive/d3q-latest; \
rm -f make-d3q uncompress-d3q
# delete unpacked directory and its links, keep the archive
(cd ..; \
i=D3Q; \
while j=$(readlink $i);do rm -rf $i; i=$j;done;\
rm -rf $i\
); \
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/install'
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/install'
if test -d ../LAPACK; then (rm -R -f ../LAPACK ../lapack-3.6.1); fi
if test -d ../ELPA; then (rm -R -f ../ELPA); fi
if test -d ../S3DE; then (rm -R -f ../S3DE); fi
if test -d ../iotk; then (rm -R -f ../iotk); fi
if test -e ../S3DE/iotk/src/iotk.x; then (rm -f ../S3DE/iotk/src/iotk.x); fi
rm -f ../bin/iotk; \
rm -f ../bin/iotk.x; \
rm -f ../bin/iotk_print_kinds.x; \
rm -f ../iotk
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/install'
rm -rf install/patch-plumed
cd install ; rm -f config.log configure.msg config.status \
CPV/version.h ChangeLog* intel.pcl */intel.pcl
rm -rf include/configure.h install/make_wannier90.inc
cd install ; rm -fr autom4te.cache
cd pseudo; ./clean_ps ; cd -
/home/user001/q-e-qe-6.2.0
cd install; ./clean.sh ; cd -
/home/user001/q-e-qe-6.2.0
cd include; ./clean.sh ; cd -
/home/user001/q-e-qe-6.2.0
rm -f espresso.tar.gz -
rm -rf make.inc -
rm -rf FoX
checking build system type... x86_64-pc-linux-gnu
checking ARCH... x86_64
checking setting AR... ... ar
checking setting ARFLAGS... ... ruv
checking for gfortran... gfortran
checking whether we are using the GNU Fortran compiler... no
checking whether gfortran accepts -g... no
checking whether the Fortran compiler works... ^C%
user001:q-e-qe-6.2.0/ $ make clean
[16:19:06][TeLiSc Cluster OS] Makefile:9: make.inc: No such file or directory
make: *** No rule to make target 'make.inc'. Stop.
user001:q-e-qe-6.2.0/ $ ./configure --disable-parallel
[16:19:09][TeLiSc Cluster OS] checking build system type... x86_64-pc-linux-gnu
checking ARCH... x86_64
checking setting AR... ... ar
checking setting ARFLAGS... ... ruv
checking for gfortran... gfortran
checking whether we are using the GNU Fortran compiler... no
checking whether gfortran accepts -g... no
checking whether the Fortran compiler works... yes
checking for Fortran compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU Fortran compiler... (cached) no
checking whether gfortran accepts -g... (cached) no
checking for Fortran flag to compile .f90 files... none
checking version of gfortran... gfortran 8.1
setting F90... gfortran
setting MPIF90... gfortran
checking for cc... cc
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ISO C89... unsupported
setting CC... cc
setting CFLAGS... -O3
checking for gfortran... gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
setting F77... gfortran
using F90... gfortran
setting FFLAGS... -O3 -g
setting F90FLAGS... $(FFLAGS) -x f95-cpp-input
setting FFLAGS_NOOPT... -O0 -g
setting CPP... cpp
setting CPPFLAGS... -P -traditional
setting LD... gfortran
setting LDFLAGS... -g -pthread
checking whether make sets $(MAKE)... yes
checking whether Fortran files must be preprocessed... no
checking for library containing dgemm... no
MKL not found
in /opt/intel/composer*/mkl/lib/intel64: checking for library containing dgemm... no
MKL not found
in /opt/intel/Compiler/*/*/mkl/lib/em64t: checking for library containing dgemm... no
MKL not found
in /opt/intel/mkl/*/lib/em64t: checking for library containing dgemm... no
MKL not found
in /opt/intel/mkl*/lib/em64t: checking for library containing dgemm... no
MKL not found
in /opt/intel/mkl/lib: checking for library containing dgemm... no
MKL not found
in /clusterapps/openMPI/3.0.0/lib: checking for library containing dgemm... no
MKL not found
checking for library containing dgemm... no
in /usr/local/lib: checking for library containing dgemm... no
in /clusterapps/openMPI/3.0.0/lib: checking for library containing dgemm... no
checking for library containing dgemm... no
in /usr/local/lib: checking for library containing dgemm... no
in /clusterapps/openMPI/3.0.0/lib: checking for library containing dgemm... no
setting BLAS_LIBS...
checking for library containing dspev... no
in /usr/local/lib: checking for library containing dspev... no
in /clusterapps/openMPI/3.0.0/lib: checking for library containing dspev... no
checking how to run the C preprocessor... cc -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... no
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking FFT... in /clusterapps/openMPI/3.0.0/lib: checking for DftiComputeForward in -lmkl_intel_lp64... no
checking for library containing dfftw_execute_dft... no
in /usr/local/lib: checking for library containing dfftw_execute_dft... no
in /clusterapps/openMPI/3.0.0/lib: checking for library containing dfftw_execute_dft... no
checking MASS...
checking ELPA...
checking for ranlib... ranlib
checking for wget... wget -O
setting WGET... wget -O
setting DFLAGS... -D__FFTW
setting IFLAGS... -I$(TOPDIR)/include -I$(TOPDIR)/FoX/finclude -I../include/
configure: creating ./config.status
config.status: creating install/make_lapack.inc
config.status: creating include/configure.h
config.status: creating make.inc
config.status: creating configure.msg
config.status: creating install/make_wannier90.inc
config.status: creating include/c_defs.h
--------------------------------------------------------------------
ESPRESSO can take advantage of several optimized numerical libraries
(essl, fftw, mkl...). This configure script attempts to find them,
but may fail if they have been installed in non-standard locations.
If a required library is not found, the local copy will be compiled.
The following libraries have been found:
BLAS_LIBS=
LAPACK_LIBS=$(TOPDIR)/LAPACK/liblapack.a $(TOPDIR)/LAPACK/libblas.a
FFT_LIBS=
Please check if this is what you expect.
If any libraries are missing, you may specify a list of directories
to search and retry, as follows:
./configure LIBDIRS="list of directories, separated by spaces"
Configured for compilation of serial executables.
For more info, read the ESPRESSO User's Guide (Doc/users-guide.tex).
--------------------------------------------------------------------
configure: successfull error in "make all":
test -d bin || mkdir bin
( cd FFTXlib ; make TLDEPS= all || exit 1 )
make[1]: Entering directory '/home/user001/q-e-qe-6.2.0/FFTXlib'
gfortran -O3 -g -x f95-cpp-input -D__FFTW -I/home/user001/q-e-qe-6.2.0//include -I/home/user001/q-e-qe-6.2.0//FoX/finclude -I../include/ -c fft_param.f90
f951: Warning: Nonexistent include directory ‘/home/user001/q-e-qe-6.2.0//FoX/finclude’ [-Wmissing-include-dirs]
gfortran -O3 -g -x f95-cpp-input -D__FFTW -I/home/user001/q-e-qe-6.2.0//include -I/home/user001/q-e-qe-6.2.0//FoX/finclude -I../include/ -c fft_support.f90
f951: Warning: Nonexistent include directory ‘/home/user001/q-e-qe-6.2.0//FoX/finclude’ [-Wmissing-include-dirs]
/tmp/ccaYwsWh.s: Assembler messages:
/tmp/ccaYwsWh.s:20: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:20: Error: junk at end of line, first unrecognized character is `-'
/tmp/ccaYwsWh.s:22: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:22: Error: unknown pseudo-op: `.lvu1'
/tmp/ccaYwsWh.s:26: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:26: Error: unknown pseudo-op: `.lvu2'
/tmp/ccaYwsWh.s:29: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:29: Error: unknown pseudo-op: `.lvu3'
/tmp/ccaYwsWh.s:47: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:47: Error: unknown pseudo-op: `.lvu4'
/tmp/ccaYwsWh.s:50: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:50: Error: unknown pseudo-op: `.lvu5'
/tmp/ccaYwsWh.s:52: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:52: Error: unknown pseudo-op: `.lvu6'
/tmp/ccaYwsWh.s:56: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:56: Error: unknown pseudo-op: `.lvu7'
/tmp/ccaYwsWh.s:59: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:59: Error: unknown pseudo-op: `.lvu8'
/tmp/ccaYwsWh.s:63: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:63: Error: unknown pseudo-op: `.lvu9'
/tmp/ccaYwsWh.s:65: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:65: Error: unknown pseudo-op: `.lvu10'
/tmp/ccaYwsWh.s:70: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:70: Error: unknown pseudo-op: `.lvu11'
/tmp/ccaYwsWh.s:72: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:72: Error: unknown pseudo-op: `.lvu12'
/tmp/ccaYwsWh.s:75: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:75: Error: unknown pseudo-op: `.lvu13'
/tmp/ccaYwsWh.s:86: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:86: Error: unknown pseudo-op: `.lvu14'
/tmp/ccaYwsWh.s:89: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:89: Error: unknown pseudo-op: `.lvu15'
/tmp/ccaYwsWh.s:97: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:97: Error: unknown pseudo-op: `.lvu16'
/tmp/ccaYwsWh.s:101: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:101: Error: unknown pseudo-op: `.lvu17'
/tmp/ccaYwsWh.s:104: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:104: Error: unknown pseudo-op: `.lvu18'
/tmp/ccaYwsWh.s:107: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:107: Error: unknown pseudo-op: `.lvu19'
/tmp/ccaYwsWh.s:110: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:110: Error: unknown pseudo-op: `.lvu20'
/tmp/ccaYwsWh.s:115: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:115: Error: unknown pseudo-op: `.lvu21'
/tmp/ccaYwsWh.s:120: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:120: Error: unknown pseudo-op: `.lvu22'
/tmp/ccaYwsWh.s:124: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:124: Error: unknown pseudo-op: `.lvu23'
/tmp/ccaYwsWh.s:129: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:129: Error: unknown pseudo-op: `.lvu24'
/tmp/ccaYwsWh.s:138: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:138: Error: unknown pseudo-op: `.lvu25'
/tmp/ccaYwsWh.s:145: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:145: Error: unknown pseudo-op: `.lvu26'
/tmp/ccaYwsWh.s:148: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:148: Error: unknown pseudo-op: `.lvu27'
/tmp/ccaYwsWh.s:174: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:174: Error: unknown pseudo-op: `.lvu28'
/tmp/ccaYwsWh.s:186: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:186: Error: unknown pseudo-op: `.lvu29'
/tmp/ccaYwsWh.s:188: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:188: Error: unknown pseudo-op: `.lvu30'
/tmp/ccaYwsWh.s:191: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:191: Error: unknown pseudo-op: `.lvu31'
/tmp/ccaYwsWh.s:196: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:196: Error: unknown pseudo-op: `.lvu32'
/tmp/ccaYwsWh.s:206: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:206: Error: unknown pseudo-op: `.lvu33'
/tmp/ccaYwsWh.s:226: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:226: Error: unknown pseudo-op: `.lvu34'
/tmp/ccaYwsWh.s:231: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:231: Error: unknown pseudo-op: `.lvu35'
/tmp/ccaYwsWh.s:237: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:237: Error: unknown pseudo-op: `.lvu36'
/tmp/ccaYwsWh.s:242: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:242: Error: unknown pseudo-op: `.lvu37'
/tmp/ccaYwsWh.s:245: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:245: Error: unknown pseudo-op: `.lvu38'
/tmp/ccaYwsWh.s:250: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:250: Error: unknown pseudo-op: `.lvu39'
/tmp/ccaYwsWh.s:257: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:257: Error: unknown pseudo-op: `.lvu40'
/tmp/ccaYwsWh.s:260: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:260: Error: unknown pseudo-op: `.lvu41'
/tmp/ccaYwsWh.s:263: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:263: Error: unknown pseudo-op: `.lvu42'
/tmp/ccaYwsWh.s:270: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:270: Error: unknown pseudo-op: `.lvu43'
/tmp/ccaYwsWh.s:272: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:272: Error: unknown pseudo-op: `.lvu44'
/tmp/ccaYwsWh.s:290: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:290: Error: junk at end of line, first unrecognized character is `-'
/tmp/ccaYwsWh.s:292: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:292: Error: unknown pseudo-op: `.lvu46'
/tmp/ccaYwsWh.s:301: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:301: Error: unknown pseudo-op: `.lvu47'
/tmp/ccaYwsWh.s:305: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:305: Error: unknown pseudo-op: `.lvu48'
/tmp/ccaYwsWh.s:308: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:308: Error: unknown pseudo-op: `.lvu49'
/tmp/ccaYwsWh.s:318: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:318: Error: unknown pseudo-op: `.lvu50'
/tmp/ccaYwsWh.s:321: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:321: Error: unknown pseudo-op: `.lvu51'
/tmp/ccaYwsWh.s:324: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:324: Error: unknown pseudo-op: `.lvu52'
/tmp/ccaYwsWh.s:328: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:328: Error: unknown pseudo-op: `.lvu53'
/tmp/ccaYwsWh.s:334: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:334: Error: unknown pseudo-op: `.lvu54'
/tmp/ccaYwsWh.s:344: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:344: Error: unknown pseudo-op: `.lvu55'
/tmp/ccaYwsWh.s:349: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:349: Error: unknown pseudo-op: `.lvu56'
/tmp/ccaYwsWh.s:365: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:365: Error: unknown pseudo-op: `.lvu57'
/tmp/ccaYwsWh.s:380: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:380: Error: unknown pseudo-op: `.lvu58'
/tmp/ccaYwsWh.s:387: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:387: Error: unknown pseudo-op: `.lvu59'
/tmp/ccaYwsWh.s:391: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:391: Error: unknown pseudo-op: `.lvu60'
/tmp/ccaYwsWh.s:395: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:395: Error: unknown pseudo-op: `.lvu61'
/tmp/ccaYwsWh.s:404: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:404: Error: unknown pseudo-op: `.lvu62'
/tmp/ccaYwsWh.s:416: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:416: Error: junk at end of line, first unrecognized character is `-'
/tmp/ccaYwsWh.s:418: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:418: Error: unknown pseudo-op: `.lvu64'
/tmp/ccaYwsWh.s:420: Error: unknown .loc sub-directive `view'
/tmp/ccaYwsWh.s:420: Error: unknown pseudo-op: `.lvu65'
make[1]: *** [../make.inc:16: fft_support.o] Error 1
make[1]: Leaving directory '/home/user001/q-e-qe-6.2.0/FFTXlib'
make: *** [Makefile:177: libfft] Error 1Edit: the report was impossible to read, formatted.
Edited by Pietro