Commit 8cb7d041 authored by Chen Qian's avatar Chen Qian
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Add ParticleViewer

parent 8ce88ac8
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.. _particle_viewer:

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Particle Viewer for Phasor
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This module is designed to view particle tracking data generated by ParticleDetection.

The program requires particle tracking data from **ParticleDetection** (*.phr* files) and can optionally use framewise phasor data from **PAM** (*.phf* files).

Currently, the program supports viewing track overlays on the original image data, plotting intensity and lifetime data of each track, and exporting both the overlay image and the data plots for each track.

The program also supports basic background correction by a framewise subtraction of the average intensity surrounding the particle region. It can also fill gaps in the tracking data through linear interpolation of adjacent particle positions. Both of these functions require the appropriate framewise phasor data to be loaded in addition to the tracking data.