Commit 300b4ce4 authored by Denis Jacob Machado's avatar Denis Jacob Machado


parent d7c84df3
......@@ -46,7 +46,7 @@ have problems.
The program awa-trim can be used as a stand-alone
The programs awa-map and awa-boot require a working
The programs awa-map and awa-bootstrap require a working
installation of Bowtie2 (see
......@@ -82,13 +82,10 @@ adjacent neighbors. The program will not say if the DNA is
circular, it will only provide information necessary for the
user to make that decision based on his own criteria.
The program awa-boot is used by developers to see how
The program awa-bootstrap is used by developers to see how
sensitive the program is to random deletion or addition of
bases on the 100 pb in the middle of the flipped sequence.
A complete tutorial with example files in currently being
prepared and should be available soon.
As it is, download awa scripts and the awa_module folder to
......@@ -96,9 +93,14 @@ your computer, make the scripts executable, and add them to
your PATH. Make sure the awa_module folder is in the same
directory as the 3 awa scripts.
See simple tutorial available at AWA's Wiki:
Machado D.J., Janies D., Brouwer C. R., & Grant T.(under
review). Four New Complete Mitochondrial Genomes of Frogs
and a New Strategy to Infer Circularity. _Ecology and
Evolution_ (submitted Sep. 9, 2017).
\ No newline at end of file
Evolution_ (submitted Sep. 9, 2017).
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