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Update Tutorial authored by Denis Jacob Machado's avatar Denis Jacob Machado
......@@ -30,14 +30,13 @@ python3 awa-map.py -i index_31mer -f example_31mer.fa -r reads.fq -s alignment_3
The program AWA map will print some stats on the standard output about the quality of the putative circular sequence. These variables should help the user decide between different putative circular sequences. Please see original publication for details on how to interpret these values:
>>>
//
"//
STATS
Match <percentage>
Avg. coverage <float>
Avg. connection <float>
Avg. quality <float>
Avg. alignment score <float>
//
//"
>>>
<<<