@@ -52,17 +52,9 @@ The HMM file generation and the SNAP prediction with MAKER and the new HMM file
#### Prediction with BRAKER2
[Augustus](#augustus) species model is computed with [BRAKER2](#braker2) using the first genome assembly (12X.v0). BRAKER2 is run calling [GeneMark-ETP](#genemark-etp)
AUGUSTUS species model is computed with [BRAKER2](#braker2). In this pipeline, BRAKER2 will use RNA-Seq primary alignments and protein data to run an initial alignment with GeneMark-ETP. Then, AUGUSTUS is trained on GeneMark-ETP predictions and genes with hints are predicted by AUGUSTUS.
