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Update Pipeline description authored by Marie Lahaye's avatar Marie Lahaye
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Pipeline-description.md
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......@@ -54,7 +54,7 @@ The HMM file generation and the SNAP prediction with MAKER and the new HMM file
AUGUSTUS species model is computed with [BRAKER2](#braker2). In this pipeline, BRAKER2 will use RNA-Seq primary alignments and protein data to run an initial alignment with GeneMark-ETP. Then, AUGUSTUS is trained on GeneMark-ETP predictions and genes with hints are predicted by AUGUSTUS.
![BRAKER2](uploads/450f6eee445f6f6ec70d326b548f5293/BRAKER2.png)
![BRAKER2](uploads/2762c5fe162bffaa051b8ebbd756df71/BRAKER2.png)
#### Prediction with GeneID
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