science/py-PyNE: Add the moab dependency; Install the nuc_data.h5 file; Build in parallel

science/py-PyNE/Makefile

 PORTNAME=	PyNE
 DISTVERSION=	0.7.5
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	http://raw.githubusercontent.com/pyne/data/master/:decay \
 		http://raw.githubusercontent.com/pyne/data/master/:cram \
 		http://raw.githubusercontent.com/pyne/data/master/:dlc \
-		http://raw.githubusercontent.com/pyne/data/master/:clc
+		http://raw.githubusercontent.com/pyne/data/master/:clc \
+		https://github.com/pyne/data/raw/master/:nuc_data
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
 DISTFILES=	decay.tar.gz:decay \
 		cram.tar.gz:cram \
 		decay-linux-clang.tar.gz:dlc \
-		cram-linux-clang.tar.gz:clc
+		cram-linux-clang.tar.gz:clc \
+		prebuilt_nuc_data.h5:nuc_data
 DIST_SUBDIR=	${PORTNAME}-${PORTVERSION}
 EXTRACT_ONLY=	${DISTNAME}.tar.gz
 
@@ -26,6 +29,7 @@ PY_DEPENDS=	${PYNUMPY} \
 BUILD_DEPENDS=	cmake:devel/cmake \
 		${PY_DEPENDS}
 LIB_DEPENDS=	libhdf5.so:science/hdf5 \
+		libMOAB.so:math/moab \
 		libsz.so:science/szip
 RUN_DEPENDS=	${PY_DEPENDS}
 
@@ -39,8 +43,15 @@ GH_PROJECT=	pyne
 MAKE_ENV=	DESTDIR=${STAGEDIR}
 FFLAGS+=	-fallow-argument-mismatch
 
-PYDISTUTILS_BUILDARGS=	--slow	# this chooses slow compilation of sources from {decay,cram}.tar.gz
-				# over incompatible pre-compiled assembly from {decay,cram}-linux-clang.tar.gz
+# all arguments are described here: http://pyne.io/install/source.html#source
+PY_EXTRA_ARGS=	--slow	# this chooses slow compilation of sources from {decay,cram}.tar.gz
+			# over incompatible pre-compiled assembly from {decay,cram}-linux-clang.tar.gz
+PY_EXTRA_ARGS+=	${_MAKE_JOBS}
+PY_EXTRA_ARGS+=	--hdf5 ${LOCALBASE}
+PY_EXTRA_ARGS+=	--moab ${LOCALBASE}
+
+PYDISTUTILS_CONFIGUREARGS=	${PY_EXTRA_ARGS}
+PYDISTUTILS_BUILDARGS=		${PY_EXTRA_ARGS}
 
 post-extract:
 .for f in decay.tar.gz cram.tar.gz decay-linux-clang.tar.gz cram-linux-clang.tar.gz
@@ -48,9 +59,11 @@ post-extract:
 .endfor
 
 do-install:
-	# install
+	# install project
 	cd ${INSTALL_WRKSRC} && \
 		${SETENV} ${MAKE_ENV} ${PYTHON_CMD} ${PYDISTUTILS_SETUP} ${PYDISTUTILS_INSTALL_TARGET}
+	# also install nuc_data.h5 because it is referred to in the code and is required by Jupyter notebooks
+	${INSTALL_DATA} ${DISTDIR}/${DIST_SUBDIR}/prebuilt_nuc_data.h5 ${STAGEDIR}${PYTHON_SITELIBDIR}/pyne/nuc_data.h5
 	# strip
 	${STRIP_CMD} \
 		${STAGEDIR}${LOCALBASE}/lib/lib*.so \

science/py-PyNE/distinfo

-TIMESTAMP = 1633733586
+TIMESTAMP = 1633887568
 SHA256 (PyNE-0.7.5/decay.tar.gz) = aa1aa69cb84685731eb234c046c56f9167a0bcc9686ccd5437f62186ac9bd441
 SIZE (PyNE-0.7.5/decay.tar.gz) = 8012492
 SHA256 (PyNE-0.7.5/cram.tar.gz) = 5ea1443226234787e0b8ef7f1d4c9cb0a6846b9da00bc843557051ad74e4a2f5
@@ -7,5 +7,7 @@ SHA256 (PyNE-0.7.5/decay-linux-clang.tar.gz) = 6fa05231e7fbfe5994e9a6705131bdcac
 SIZE (PyNE-0.7.5/decay-linux-clang.tar.gz) = 18904467
 SHA256 (PyNE-0.7.5/cram-linux-clang.tar.gz) = 0a7a04b5268db91fea7bec75dbefe3ec23036f9e250aacc6fb353d17d8e84538
 SIZE (PyNE-0.7.5/cram-linux-clang.tar.gz) = 20477898
+SHA256 (PyNE-0.7.5/prebuilt_nuc_data.h5) = 77a8fbda6db3ed154766f4a7c134651ba710f52d35304f0e456dc6f7e7a69936
+SIZE (PyNE-0.7.5/prebuilt_nuc_data.h5) = 13021601
 SHA256 (PyNE-0.7.5/pyne-pyne-0.7.5_GH0.tar.gz) = 80143d5e232b89ffd89121363c0e1e615acc28c26f5d7682521eb9baf98311c4
 SIZE (PyNE-0.7.5/pyne-pyne-0.7.5_GH0.tar.gz) = 9262728

science/py-PyNE/pkg-plist

@@ -206,6 +206,7 @@ lib/libpyne.so
 %%PYTHON_SITELIBDIR%%/pyne/mcnp.py
 %%PYTHON_SITELIBDIR%%/pyne/mesh.py
 %%PYTHON_SITELIBDIR%%/pyne/njoy.py
+%%PYTHON_SITELIBDIR%%/pyne/nuc_data.h5
 %%PYTHON_SITELIBDIR%%/pyne/nucname.pxd
 %%PYTHON_SITELIBDIR%%/pyne/nucname.so
 %%PYTHON_SITELIBDIR%%/pyne/openmc_utils.py
@@ -224,6 +225,7 @@ lib/libpyne.so
 %%PYTHON_SITELIBDIR%%/pyne/source.pxd
 %%PYTHON_SITELIBDIR%%/pyne/source.so
 %%PYTHON_SITELIBDIR%%/pyne/source_sampling.pxd
+%%PYTHON_SITELIBDIR%%/pyne/source_sampling.so
 %%PYTHON_SITELIBDIR%%/pyne/spatialsolver.py
 %%PYTHON_SITELIBDIR%%/pyne/spectanalysis.py
 %%PYTHON_SITELIBDIR%%/pyne/stlcontainers.pxd