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Resolve paths before ordering them in link_files/copy_files

Valentin David requested to merge valentindavid/link_files_sort_resolved into master

Description

This fixes bug in composition where some of the element have paths that become non canonical because of symlinks created in other elements. This issue happens mainly using compose. But this could happen anywhere where link_files is called with a manifest using non canonical paths.

This merge request, when approved, will close: #647 (closed)

Edited by Valentin David

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